Healthy Egg Muffins (3 Easy Ways) (2024)

BySara Updated

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Start the day the right way with these healthy egg muffins – a simple mixture of eggs and your choice of vegetables, cheese, and herbs baked into tasty mini frittatas! These muffins are a great grab-and-go breakfast and healthy snack. Three flavor ideas included!

Want more eggylicious recipes? Try these Viral Pesto Eggs and this Breakfast Frittata Sandwich!

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Table of contents

You know what they say: “breakfast is the most important meal of the day,” so I love trying new ways to incorporate nutrient-dense, balanced breakfasts into my routine. These healthy veggie egg muffins are quick, simple, and great on the go.

The best part? There’s no such thing as food boredom with this healthy egg muffin recipe in your meal prep rotation. You can choose from one of my three favorite combinations of nourishing mix-ins or use the egg base as a blank canvas and make these egg breakfast muffins your own.

While you’re here, check out more of my favorite breakfast meal prep recipes for busy mornings. Now let’s make the best egg muffins in three different flavors!

Ingredients You’ll Need

For the base recipe, you’ll need these simple ingredients.

  • Extra-virgin olive oil: You’ll need a neutral oil to coat the muffin pan and prevent the egg base from sticking. You can also use avocado oil.
  • Eggs: Eggs are a great source of lean protein. You’ll need a half dozen large eggs to make 6 to 8 egg cups (depending on the size of your muffin tin).
  • Milk (optional): It’s not necessary, but adding milk makes the egg muffins fluffy and puff up more. Try it!
  • Salt and pepper (to taste): To enhance the naturally smooth and buttery egg flavor.

For additional mix-ins, see “recipe variations” further down the page.

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How To Make

  1. Choose your flavor: First, choose the ingredients you want to use and prep the veggies.
  2. Prepare for baking: Then, preheat your oven to 400F (200C) and coat a muffin pan with extra virgin olive oil (or silicone liners). Set aside.
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  1. Mix egg base: Meanwhile, make the egg base. Crack the eggs into a large bowl and then add the milk (if using) and salt and pepper. Whisk until the eggs are light and fluffy.
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Feta, cherry tomato & basil:

  • Chop mix-ins: Cut the cherry tomatoes in half and roughly chop the basil leaves.
  • Mix: Add 4 tomato halves, fresh basil, crumbled feta, and spring onions to each cup.

Mushroom, parsley & parmesan

  • Chop and cook mushrooms: Chop the mushrooms. Heat extra virgin olive oil in a pan on medium heat, and then add the chopped mushrooms. Season to taste with salt and pepper and cook for 5 minutes. Add the chopped parsley and remove the pan from the heat.
  • Fill: Divide the cooked mushroom evenly between the muffin cups along with the parmesan.
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Bell pepper, sun-dried tomato & spinach

  • Cook bell pepper: Heat oil in a pan over medium heat. Add chopped red peppers and cook for 5 minutes, seasoning with salt and pepper.
  • Add spinach: Add the fresh spinach and let it wilt for a couple of minutes. Then, mix in chopped sun-dried tomatoes.
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  1. Add mix-ins: Divide your toppings and mix-ins evenly between each muffin tin, and then pour the egg mixture over the top until the cups are 3/4 full.
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  1. Bake: Transfer to your preheated oven and bake until firm and golden on top (15 to 20 minutes). Remove from the oven and let cool for 5 to 10 minutes before taking them off the pan.
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These 3 variations are just some ideas!

I love breakfast muffins because you can pretty much use any leftover veggies to make a delicious breakfast.

Feel free to use your favorite veggies, cheese (cheddar cheese and goat cheese work great), and lots of fresh herbs for extra flavor to bring these baked egg muffins to the next level!

How to Store

Storing: To store, let them cool completely. Then, transfer them to an airtight container (or single-serving resealable bags) and refrigerate them for up to 4 days. They can also be wrapped individually in some parchment paper and frozen for up to 3 months.

Reheating: To reheat, place them on a microwave-safe plate wrapped in a paper towel and microwave for 30 seconds to a minute (until the center is heated through) – 1 to 2 minutes if frozen.

These healthy egg muffin cups are delicious eaten warm or at room temperature.

Don’t forget to check out this incredible Beginner’s Meal Prep Guide: to Stress-Free Cooking!

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Tips

Grease your muffin tin WELL: A layer of oil between the egg mixture and the tin will prevent the muffins from sticking, so don’t forget to generously coat your muffin pan with oil.

Silicone muffin pan/liners: If you happen to have a silicone muffin pan, be sure to grease that as well. You can also use liners or parchment paper to line the muffin cups.

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F.A.Q.

Can I make healthy egg muffins with all egg whites?

I don’t recommend using all egg whites. The muffins need some fat from the egg yolks to stay soft and moist. Using all egg whites may result in chewy, spongey egg muffins. If you want to incorporate egg whites, I recommend using whole eggs and egg whites equally.

Do you need to spray silicone muffin cups?

It depends on what you’re making, but for egg muffins, yes – you should coat silicone muffin cups with oil so they pop right out of the molds when they’re ready.

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Why I Love This Recipe

  • Great on-the-go protein-packed breakfast and healthy snack.
  • Vegetarian, gluten-free, and can easily be made without any cheese or dairy.
  • Easy to customize with different veggies, cheeses, and flavors.
  • Great healthy make-ahead breakfast – make one batch for now and freeze a batch for later.

Other Healthy Quick Breakfasts You’ll Love

  • Healthy Berry Smoothie
  • Strawberry Overnight Oats
  • Healthy Oil-free Granola
  • Avocado Sandwich
  • Cottage Cheese With Fruit

And for more meal prep breakfasts, check out these 25 easy breakfast recipes.

If you try this healthy egg muffins recipe, please leave a comment and a rating and let me know how much you liked it!

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Healthy Egg Muffins (3 Easy Ways)

Start the day the right way with these healthy egg muffins – a simple mixture of eggs and your choice of vegetables, cheeses, and herbs baked into tasty mini frittatas! These muffins are a great grab-and-go breakfast and healthy snack. Three flavor ideas included!

Prep Time10 minutes mins

Cook Time20 minutes mins

Total Time30 minutes mins

Course: Breakfast

Cuisine: Vegetarian

Servings: 6 muffins

Calories: 90kcal

Author: Sara Trezzi

Ingredients

Egg base

  • 1 tablespoon extra-virgin olive oil
  • 6 large eggs
  • ¼ cup milk - optional – you can substitute for any plant-based milk or omit it entirely
  • Salt and pepper to taste

Feta, Cherry Tomatoes & Basil (for 6 egg muffins)

  • ¼ cup crumbled feta
  • 12 cherry tomatoes
  • 12 basil leaves
  • 2 spring onions - finely sliced

Mushrooms, Parsley & Parmesan (for 6 egg muffins)

  • 1/2 tablespoon extra-virgin olive oil
  • 2 cups chestnut mushrooms
  • Salt and pepper
  • 3 tablespoons fresh parsley - chopped
  • ¼ cup grated parmesan

Bell Peppers, Sundried Tomatoes & Spinach (for 6 egg muffins)

  • 1/2 tablespoon extra-virgin olive oil
  • 1 bell pepper - chopped (I used ½ green and ½ red bell pepper)
  • Salt and pepper
  • 3 sundried tomatoes
  • 2 cups packed fresh baby spinach

Instructions

Egg base (same for all variations)

  • Preheat the oven to 400F (200C). Coat a muffin pan with extra-virgin olive oil. Or, you can use silicon liners too.

  • Crack the 6 eggs into a large bowl, add salt and pepper and the milk (if using it), and whisk until the eggs are airy and fluffy.

Feta, Cherry Tomatoes & Basil

  • Roughly chop the basil leaves, and cut in half the cherry tomatoes.

  • Add 4 cherry tomato halves to each muffin tray, and sprinkle with the chopped basil, crumbled feta, and spring onions.

  • Fill each muffin tray with the egg mix until they are ¾ full, and bake at 400F (200C) for 15-20 minutes until the egg muffins look golden on top. Remove the pan from the oven, let the muffins cool slightly, and then remove them from the pan.

Mushrooms, Parsley & Parmesan

  • Chop the mushrooms. Heat a pan on medium heat, add the extra-virgin olive oil, add the mushrooms, salt, and pepper to taste, and let them cook for 5 minutes. Add the chopped parsley, and remove it from the heath.

  • Divide the mushrooms evenly into the muffin tray, add the parmesan, and fill each muffin cup with the egg mix until they are ¾ full and bake at 400F (200C) for 15-20 minutes until the egg muffins look golden on top. Remove the pan from the oven, let the muffins cool slightly, and then remove them from the pan.

Bell Peppers, Sundried Tomatoes & Spinach

  • Heat a pan on medium heat, add the extra-virgin olive oil, add the chopped bell peppers, salt, and pepper to taste, and let them cook for 5 minutes. Add the baby spinach, and let them wilt for a couple of minutes. Chop the sundried tomatoes, and mix them in.

  • Divide the mixture evenly into the muffin tray.

  • Fill each muffin cup with the egg mix until they are ¾ full, and bake at 400F (200C) for 15-20 minutes until the egg muffins look golden on top. Remove the pan from the oven, let the muffins cool slightly, and then remove them from the pan.

Notes

Note 1: These healthy egg muffin cups are delicious eaten warm or at room temperature.

Note 2: Grease your muffin tin WELL to prevent the muffins from sticking.

How to Store: Let the muffins cool completely. Then, transfer them to an airtight container (or single-serving resealable bags) and refrigerate them for up to 4 days. Egg muffins can also be wrapped individually and frozen for up to 3 months.

To reheat your egg muffins, place them on a microwave-safe plate wrapped in a paper towel and microwave for 30 seconds to a minute ( until the center is heated through)—1 to 2 minutes from frozen.

*Nutrition information is a rough estimate per serving of the basic egg muffin recipe.

Nutrition

Calories: 90kcal | Carbohydrates: 1g | Protein: 6g | Fat: 7g | Sugar: 1g

Did you make this recipe? Tag @gatheringdreams on Instagram. I want to see it!

More Quick Breakfasts

  • Strawberry Overnight Oats

  • Avocado Sandwich (Creamy And Full Of Veggies)

  • 25 Healthy Breakfast Ideas To Stay Energized All Day

  • 25 Healthy Breakfast Meal Prep Ideas For Busy Mornings

Healthy Egg Muffins (3 Easy Ways) (2024)

FAQs

What makes a muffin healthy or unhealthy? ›

Signs of a healthy muffin recipe are whole-food ingredients like fruit, veggies, nuts, seeds, eggs, and low-fat milk and yogurt (or a dairy-free alternative). Fats from plant-based oils or moderate amounts of butter can be incorporated into a muffin recipe — remember, you are making 12 servings.

Are egg bites healthy? ›

Egg bites are an easy to prep, inexpensive meal and snack option. They're high in protein, 9-11 grams per bite, and low in calories, 90-100 calories per bite, to fit your macro needs. They are also very easy to grab and eat when you're in a hurry.

How many calories are in an egg muffin? ›

Nutrition Facts
For a Serving Size of 1 muffin (132.96g)
How many calories are in Egg Muffins? Amount of calories in Egg Muffins: Calories 166.5Calories from Fat 101.4 (60.9%)
% Daily Value *
How much fat is in Egg Muffins? Amount of fat in Egg Muffins: Total Fat 11.3g-
73 more rows

How long will egg muffins last in the fridge? ›

Storage & Reheating Instructions: Cover leftover egg muffins and store in the refrigerator for up to 5 days. Microwave: Wrap or cover egg muffins with a damp paper towel and microwave for 20–30 seconds, or until warmed through. (Don't overheat, or they will taste rubbery.)

What is the healthiest type of muffin? ›

English muffins made from whole grains or English muffins with no added sugar are the healthiest options, given that these options have increased nutritional value. Whole wheat English muffins contain more fiber, less calories, and less sugar than other English muffin varieties.

Will I gain weight if I eat a muffin? ›

Now muffins aren't all bad. These things are only unhealthy if eaten on a regular basis. If every so often you want a muffin for breakfast or a snack, that's no big deal. When you grab a bakery muffin for breakfast daily, that's when you increase your risk for unwanted weight gain and other health issues.

Are McDonald's egg muffins healthy? ›

The Egg McMuffin with Canadian bacon and cheese will stoke you with 17 grams of protein per 310-calorie sandwich. Just be sure to keep tabs on your sodium and saturated fat intake for the rest of the day, and aim to prioritize fruits and veggies in the rest of your meals and snacks to fill in the fiber gap.

Why do my egg muffins stick? ›

To prevent egg muffins from sticking to the tin, follow these steps: Properly Grease Your Muffin Tin:Use an olive oil spray to thoroughly grease each muffin cup, including the sides and bottom. Use Silicone Muffin Cups:Consider using silicone cups or liners, which are naturally nonstick.

Why do my egg muffins deflate? ›

Egg muffins will rise too much when you skip the water bath, causing them to deflate as they cool. Prevention is the key, so use the water bath as directed in this recipe. If you find the egg muffins still rise too much, use a lower oven temperature of 325ºF and increase the baking time by 5 to 10 minutes.

Why did my egg muffins turn green? ›

This harmless but unappealing color change is the result of a chemical reaction between iron in the pan and sulfur in egg whites.

Can you reheat egg muffins in the oven? ›

Yes! These egg muffins freeze well. Wrap them each individually in foil, place them in a freezer-safe container, and freeze for up to three months. Thaw in the refrigerator and reheat in the microwave or oven.

Can you freeze eggs? ›

Yes, you can freeze eggs. Eggs can be frozen for up to a year, although it is recommended to use them within 4 months for freshness. Many people find themselves being left with spare egg whites or yolks after a recipe requiring just one or the other, or even throwing out unused eggs when the box hits its expiry date.

What are 2 characteristics of a good muffin? ›

  • High-quality muffins have a thin, evenly browned crust.
  • Top is symmetrical, but looks rough.
  • When broken apart, texture is uniform and crumb is tender and light.

Why are store bought muffins unhealthy? ›

Muffins are usually rife with added sugar and saturated fats, two nutrients that you'll want to limit in your diet because they're linked to health conditions such as heart disease and obesity when eaten in excess.

Are muffins healthier than bread? ›

Is an English muffin better for you than bread? A. English muffins are slightly healthier than bread because they include fewer calories, carbohydrates, fats, and sugar than bread. However, both have a high carbohydrate content, which can offer energy throughout the day, and many nutrients.

How unhealthy is a blueberry muffin? ›

The average coffee shop blueberry muffin is hardly what you'd call a health food: It's got almost 470 calories—nearly double what you'd get from a chocolate frosted donut—and most of those calories come from refined carbohydrates, primarily white flour and sugar.

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